论文标题
基于树的探索性识别观测数据中的预测生物标志物
Tree-based exploratory identification of predictive biomarkers in observational data
论文作者
论文摘要
“分层医学”的想法是关于鉴定预测生物标志物的方法论研究的重要驱动力。到目前为止,为此目的提出的大多数方法仅用于随机数据的使用。但是,特别是对于罕见的癌症,临床注册表或观察性研究的数据可能是唯一可用的数据来源。对于此类数据,对平均治疗效果的无偏估计方法得到了很好的确定。研究治疗效果的异质性和负责此的变量时,对混杂因素调整的研究通常仅限于回归模型。在本文中,我们演示了PreDMOB是一种基于树的方法,该方法如何专门搜索预测因素,可以与常见的混杂调整策略结合使用(协方差调整,匹配,治疗加权的逆概率(IPTW))。在一项广泛的模拟研究中,我们表明协变量调整允许在存在混杂的情况下正确识别预测因素,而在真正的预测因素并不完全独立于混杂机制的情况下,IPTW失败了。两者结合,协变量调整和IPTW的结合也可以单独进行协变量调整,但在复杂的设置中可能更健壮。德国乳腺癌研究小组(GBSG)试验的应用2列出了这些结论。
The idea of "stratified medicine" is an important driver of methodological research on the identification of predictive biomarkers. Most methods proposed so far for this purpose have been developed for the use on randomized data only. However, especially for rare cancers, data from clinical registries or observational studies might be the only available data source. For such data, methods for an unbiased estimation of the average treatment effect are well established. Research on confounder adjustment when investigating the heterogeneity of treatment effects and the variables responsible for this is usually restricted to regression modelling. In this paper, we demonstrate how the predMOB, a tree-based method that specifically searches for predictive factors, can be combined with common strategies for confounder adjustment (covariate adjustment, matching, Inverse Probability of Treatment Weighting (IPTW)). In an extensive simulation study, we show that covariate adjustment allows the correct identification of predictive factors in the presence of confounding whereas IPTW fails in situations in which the true predictive factor is not completely independent of the confounding mechanism. A combination of both, covariate adjustment and IPTW performs as well as covariate adjustment alone, but might be more robust in complex settings. An application to the German Breast Cancer Study Group (GBSG) Trial 2 illustrates these conclusions.