论文标题
SADM:纵向医学图像生成的序列感知扩散模型
SADM: Sequence-Aware Diffusion Model for Longitudinal Medical Image Generation
论文作者
论文摘要
由于短期(例如心跳)和长期(例如衰老)因素的复杂混合,人体器官不断发生解剖变化。显然,对这些因素的先验知识在对其未来状态进行建模时,即通过图像产生将是有益的。但是,大多数医学图像生成任务仅依赖于单个图像的输入,从而忽略了顺序依赖性,即使有纵向数据可用。序列感知的深层生成模型,其中模型输入是一系列有序和时间戳图像,在医学成像域中仍未散发出任何独特的挑战:1)各个长度的序列; 2)缺少数据或框架,3)高维度。为此,我们提出了一个纵向医学图像的序列感知扩散模型(SADM)。最近,扩散模型显示出高保真图像产生的有希望的结果。我们的方法通过在扩散模型中引入序列感知变压器作为条件模块来扩展这种新技术。新颖的设计使学习纵向依赖性即使在训练过程中缺少数据,并可以在推理过程中自动产生一系列图像。我们对3D纵向医学图像的广泛实验证明了与基准和替代方法相比,萨特的有效性。该代码可在https://github.com/ubc-tea/sadm-longutinal-medical-image-generation上找到。
Human organs constantly undergo anatomical changes due to a complex mix of short-term (e.g., heartbeat) and long-term (e.g., aging) factors. Evidently, prior knowledge of these factors will be beneficial when modeling their future state, i.e., via image generation. However, most of the medical image generation tasks only rely on the input from a single image, thus ignoring the sequential dependency even when longitudinal data is available. Sequence-aware deep generative models, where model input is a sequence of ordered and timestamped images, are still underexplored in the medical imaging domain that is featured by several unique challenges: 1) Sequences with various lengths; 2) Missing data or frame, and 3) High dimensionality. To this end, we propose a sequence-aware diffusion model (SADM) for the generation of longitudinal medical images. Recently, diffusion models have shown promising results in high-fidelity image generation. Our method extends this new technique by introducing a sequence-aware transformer as the conditional module in a diffusion model. The novel design enables learning longitudinal dependency even with missing data during training and allows autoregressive generation of a sequence of images during inference. Our extensive experiments on 3D longitudinal medical images demonstrate the effectiveness of SADM compared with baselines and alternative methods. The code is available at https://github.com/ubc-tea/SADM-Longitudinal-Medical-Image-Generation.