论文标题

rlogist:全面的图像快速观察策略,并深入增强学习

RLogist: Fast Observation Strategy on Whole-slide Images with Deep Reinforcement Learning

论文作者

Zhao, Boxuan, Zhang, Jun, Ye, Deheng, Cao, Jian, Han, Xiao, Fu, Qiang, Yang, Wei

论文摘要

计算病理学中的全扫描图像(WSI)具有高分辨率的高分辨率,但通常具有稀疏的感兴趣区域,这会导致幻灯片中每个区域的诊断相关性较弱和数据效率低下。大多数现有方法都依赖于多个实例学习框架,该框架需要在高放大倍率下密集地对本地贴片进行采样。限制在应用阶段很明显,因为不可避免地要提取贴片级特征的重量计算。在本文中,我们开发了Rlogist,这是对WSIS快速观察策略的深入加固学习(DRL)方法的基准测试。模仿人类病理学家的诊断逻辑,我们的RL药物学习了如何找到观察值区域并在多个分辨率水平上获得代表性特征,而无需在高放大倍率下分析WSI的每个部分。我们在两个全扫描分类任务上进行基准测试我们的方法,包括检测淋巴结切片WSI的转移和肺癌的亚型。实验结果表明,与典型的多个实例学习算法相比,RLOGIST可以实现竞争性分类性能,同时具有明显短的观察路径。此外,Rlogist给出的观察路径提供了良好的决策解释性,其阅读路径导航的能力可以被病理学家用于教育/辅助目的。我们的代码可在:\ url {https://github.com/tencent-ailab/rlogist}中获得。

Whole-slide images (WSI) in computational pathology have high resolution with gigapixel size, but are generally with sparse regions of interest, which leads to weak diagnostic relevance and data inefficiency for each area in the slide. Most of the existing methods rely on a multiple instance learning framework that requires densely sampling local patches at high magnification. The limitation is evident in the application stage as the heavy computation for extracting patch-level features is inevitable. In this paper, we develop RLogist, a benchmarking deep reinforcement learning (DRL) method for fast observation strategy on WSIs. Imitating the diagnostic logic of human pathologists, our RL agent learns how to find regions of observation value and obtain representative features across multiple resolution levels, without having to analyze each part of the WSI at the high magnification. We benchmark our method on two whole-slide level classification tasks, including detection of metastases in WSIs of lymph node sections, and subtyping of lung cancer. Experimental results demonstrate that RLogist achieves competitive classification performance compared to typical multiple instance learning algorithms, while having a significantly short observation path. In addition, the observation path given by RLogist provides good decision-making interpretability, and its ability of reading path navigation can potentially be used by pathologists for educational/assistive purposes. Our code is available at: \url{https://github.com/tencent-ailab/RLogist}.

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