论文标题
使用深层神经网络从二维观察中重建了可激发媒体中三维滚动波的重建
Reconstruction of Three-dimensional Scroll Waves in Excitable Media from Two-Dimensional Observations using Deep Neural Networks
论文作者
论文摘要
卷轴混乱被认为是威胁生命的心颤振的基础。但是,当前没有直接的方法可以在整个厚的心脏心肌中传播动作电位波模式。因此,对三维电滚动波的直接观察仍然难以捉摸。在这里,我们研究是否有可能使用深度学习重建模拟的滚动波和滚动波。我们训练了编码编码的卷积神经网络,以预测散装表面上波动动力学的二维激发介质内部的三维滚动波动力学。我们测试了一个或两个相对表面的观察是否足够,以及表面变形的透明度或测量结果会增强重建。此外,我们评估了该方法对噪声的鲁棒性,并测试了预测散装厚度的可行性。我们将各向同性和各向异性区分别区分为各向异性和透明的兴奋培养基,分别是心脏组织和Belousov-Zhabotinsky化学反应的模型。虽然我们证明可以重建三维滚动波动力学,但我们还表明,重建复杂的滚动波混乱是一项挑战,并且预测结果取决于各种因素,例如透明度,各向异性以及最终与介质的厚度相比,与滚动波的大小相比。特别是,我们发现各向异性为神经网络提供了至关重要的信息来解码深度,从而促进了重建。 In the future, deep neural networks could be used to visualize intramural action potential wave patterns from epi- or endocardial measurements.
Scroll wave chaos is thought to underlie life-threatening ventricular fibrillation. However, currently there is no direct way to measure action potential wave patterns transmurally throughout the thick ventricular heart muscle. Consequently, direct observations of three-dimensional electrical scroll waves remains elusive. Here, we study whether it is possible to reconstruct simulated scroll waves and scroll wave chaos using deep learning. We trained encoding-decoding convolutional neural networks to predict three-dimensional scroll wave dynamics inside bulk-shaped excitable media from two-dimensional observations of the wave dynamics on the bulk's surface. We tested whether observations from one or two opposing surfaces would be sufficient, and whether transparency or measurements of surface deformations enhances the reconstruction. Further, we evaluated the approach's robustness against noise and tested the feasibility of predicting the bulk's thickness. We distinguished isotropic and anisotropic, as well as opaque and transparent excitable media as models for cardiac tissue and the Belousov-Zhabotinsky chemical reaction, respectively. While we demonstrate that it is possible to reconstruct three-dimensional scroll wave dynamics, we also show that it is challenging to reconstruct complicated scroll wave chaos and that prediction outcomes depend on various factors such as transparency, anisotropy and ultimately the thickness of the medium compared to the size of the scroll waves. In particular, we found that anisotropy provides crucial information for neural networks to decode depth, which facilitates the reconstructions. In the future, deep neural networks could be used to visualize intramural action potential wave patterns from epi- or endocardial measurements.